tba-2
Ncra_tba-2 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCS 130 Tubulin Tubulin_3
Asub_tba-2 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAGNNDQGFSTFFSETGNGKYVPRTIYCDLEPNVVDEVRTGAYRSLFHPEQMITGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCS 130 Tubulin Tubulin_3
Anam_tba-2 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAGNDDQGFSTFFSETGNGKYVPRTIYCDLEPNVVDEVRTGAYRSLFHPEQMITGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCS 130 Tubulin Tubulin_3
Apul_tba-2 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAGSEDQGFSTFFSETGNGKYVPRTIYCDLEPNVVDEVRTGTYRSLFHPEQMITGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCS 130 Tubulin Tubulin_3
Amel_tba-2 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAGNDDQGFSTFFSETGNGKYVPRTIYCDLEPNVVDEVRTGAYRSLFHPEQMITGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCS 130 Tubulin Tubulin_3
***:**************************************.. *:************ *******.******:******:**.*****:**:************************* *********
Ncra_tba-2 GLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYNSILTTHTTLEHADCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLV 260 Tubulin_3 Tubulin
Asub_tba-2 GLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQVATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGIERPNYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLV 260 Tubulin_3 Tubulin
Anam_tba-2 GLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQVATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGIERPNYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLV 260 Tubulin_3 Tubulin
Apul_tba-2 GLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQVATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGIERPNYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLV 260 Tubulin_3 Tubulin
Amel_tba-2 GLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQVATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGIERPNYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLV 260 Tubulin_3 Tubulin
***********************************************.** *****************:********************:******************** *******************
Ncra_tba-2 PYPRIHFPLVAYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSA 390 Tubulin_C
Asub_tba-2 PYPRIHFPLVAYAPVVSAAKSAHEANSVQEITMSCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHSAVATLKTKRTIQFVDWCPTGFKIGICYQPPQNVPNGDLAKVNRAVCMLSNTTAIAEAWSA 390 Tubulin_C
Anam_tba-2 PYPRIHFPLVAYAPVVSAAKSAHEANSVQEITMSCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHSAVATLKTKRTIQFVDWCPTGFKIGICYQPPQNVPNGDLAKVNRAVCMLSNTTAIAEAWSA 390 Tubulin_C
Apul_tba-2 PYPRIHFPLVAYAPVVSAAKSAHEANSVQEITMSCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHSAVATLKTKRTIQFVDWCPTGFKIGICYQPPQNVPNGDLAKVNRAVCMLSNTTAIAEAWSA 390 Tubulin_C
Amel_tba-2 PYPRIHFPLVAYAPVVSAAKSAHEANSVQEITMSCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHSAVATLKTKRTIQFVDWCPTGFKIGICYQPPQNVPNGDLAKVNRAVCMLSNTTAIAEAWSA 390 Tubulin_C
****************:****:*********:******** ********:****************:*.*:**********************:****** ::***************************
Ncra_tba-2 LSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVAADSMEGED-VEAEY 449 Tubulin_C Tubulin_3
Asub_tba-2 LSHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVAADSVEGEEGVEAEY 450 Tubulin_C
Anam_tba-2 LSHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVAADSVEGEEGVEAEY 450 Tubulin_C
Apul_tba-2 LSHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVAADSVEGEEGVEAEY 450 Tubulin_C
Amel_tba-2 LSHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVAADSVEGEEGVEAEY 450 Tubulin_C
*** ************************** *******************:***: ****
Input files: MFA/Ncra.CLOCK.v02.Aure.tba-2.aln (alignment), ALN//Ncra.CLOCK.v02.Aure.tba-2.dom.rgns (regions: exons, domains, low-complexity, etc)
5 sequences, alignment length = 520
sequence lengths:
449 Ncra_tba-2
450 Asub_tba-2
450 Anam_tba-2
450 Apul_tba-2
450 Amel_tba-2
| # | domain |
Ncra_tba-2 | Asub_tba-2 | Anam_tba-2 | Apul_tba-2 | Amel_tba-2 |
|---|
| 1 | Tubulin | 1 2..225
| 1 2..225
| 1 2..225
| 1 2..225
| 1 2..225
|
| 2 | Tubulin_3 | 1 82..209
2 381..437
| 1 78..203
| 1 78..203
| 1 77..203
| 1 78..203
|
| 3 | Tubulin_C | 1 262..392
| 1 262..392
| 1 262..392
| 1 262..392
| 1 262..392
|
| |
ARC.colors file was not found, using default colors.
Alignment Regions Colorize, ARC v061