ccg-1
Ncra_ccg-1 -------------------------------------------------------------------------------------------------------------MDTLKNAANYVGDKVQGATAT 21 DUF2823
Asub_ccg-1 MPLICDPVHGPPPLAASWCNASQFLGLAVKYGEGKRSSQAKNELSELPTRSFQPLLKKLPSHACSKFPFSSTNSNHIFSFQIKPTNPQPNIKMSAPNANKPNEGIVGQIGNSLNNAAQYVSETVQGTGAT 130 DUF2823
Anam_ccg-1 --------------------------------------------------------------------------------------------MSAPNANKPNEGIVGQIGNSLNNAAQYVSETVQGTSAT 38 DUF2823
Apul_ccg-1 --------------------------------------------------------------------------------------------MSAPNANAPNEGIVGQIGNSLNNAAQYVSETVQGAGAT 38 DUF2823
Amel_ccg-1 --------------------------------------------------------------------------------------------MSAPNANKPNEGIVGQIGNSLNNAAQYVSETVQGTSAT 38 DUF2823
::*:***:* .:.***: *
Ncra_ccg-1 ASKEANKDVAK--DSNQGVGTRLNAAGDAISDKVSENKHDAKAEAHKQGATH 71 DUF2823
Asub_ccg-1 ASKEANKEKAKGNSADDSISGRVSGAMGAASDKLDEKKHETSAEANKRSI-- 180 DUF2823
Anam_ccg-1 ASKEANKEQAKGNTADDSISGRVSGAMGAASDKLDEKKHEGSAEANKRSI-- 88 DUF2823
Apul_ccg-1 ASKEANKEKAKGNSADDSISGRVSGAMGAASDKVDEKKHEGSASANKNSI-- 88 DUF2823
Amel_ccg-1 ASKEANKEQAKGNTADDSISGRVSGAMGAASDKMDEKKHETSAEANKRSI-- 88 DUF2823
********: ** :::.:. *:..* .* ***:.*:**: .*.*:*..
Input files: MFA/Ncra.CLOCK.v02.Aure.ccg-1.aln (alignment), ALN//Ncra.CLOCK.v02.Aure.ccg-1.dom.rgns (regions: exons, domains, low-complexity, etc)
5 sequences, alignment length = 260
sequence lengths:
71 Ncra_ccg-1
180 Asub_ccg-1
88 Anam_ccg-1
88 Apul_ccg-1
88 Amel_ccg-1
| # | domain |
Ncra_ccg-1 | Asub_ccg-1 | Anam_ccg-1 | Apul_ccg-1 | Amel_ccg-1 |
|---|
| 1 | DUF2823 | 1 0..67
| 1 110..178
| 1 18..86
| 1 18..86
| 1 18..86
|
| |
ARC.colors file was not found, using default colors.
Alignment Regions Colorize, ARC v061