bml
Ncra_bml MREIVHLQTGQCGNQIGAAFWQTISGEHGLDASGVYNGTSELQLERMNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCL 130 Misat_Tub_SegII Tubulin Tubulin_3
Asub_bml MREIVHLQTGQCGNQVGAAFWQTISGEHGLDGAGVYNGTSDLQLERMNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAESCDCL 130 Misat_Tub_SegII Tubulin Tubulin_3
Anam_bml MREIVHLQTGQCGNQVGAAFWQTISGEHGLDGAGVYNGTSDLQLERMNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAESCDCL 130 Misat_Tub_SegII Tubulin Tubulin_3
Apul_bml MREIVHLQTGQCGNQVGAAFWQTISGEHGLDGAGVYNGTSDLQLERMNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAESCDCL 130 Misat_Tub_SegII Tubulin Tubulin_3
Amel_bml MREIVHLQTGQCGNQVGAAFWQTISGEHGLDGAGVYNGTSDLQLERMNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAESCDCL 130 Misat_Tub_SegII Tubulin Tubulin_3
***************:***************.:*******:****************** *********************************************************** *****.***
Ncra_bml QGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTVSLRFPGQLNSDLRKLAVNMVPF 260 Tubulin_3 Tubulin_C
Asub_bml QGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVMPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNQALYDICMSTLKLNNPSYGDLNYLVSAVMSGVTVSLRFPGQLNSDLRKLAVNMVPF 260 Tubulin_3 Tubulin_C
Anam_bml QGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVMPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNQALYDICMSTLKLNNPSYGDLNYLVSAVMSGVTVSLRFPGQLNSDLRKLAVNMVPF 260 Tubulin_3 Tubulin_C
Apul_bml QGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVMPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNQALYDICMSTLKLNNPSYGDLNYLVSAVMSGVTVSLRFPGQLNSDLRKLAVNMVPF 260 Tubulin_3 Tubulin_C
Amel_bml QGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVMPSPKVSDTVVEPYNATLSVHQLVENSDATFCIDNQALYDICMSTLKLNNPSYGDLNYLVSAVMSGVTVSLRFPGQLNSDLRKLAVNMVPF 260 Tubulin_3 Tubulin_C
****************************************:********* ***************** ******:******* ****.********:************ *******************
Ncra_bml PRLHFFMVGFAPLTSRGAHHFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPPRGLKMSSTFVGNSTAIQELFKRIGEQFTAMFR 390 Tubulin_C
Asub_bml PRLHFFMVGFAPLTSRNAHSFRAVSVPELTQQIFDPKNMMAATDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRIGDQFSAMFR 390 Tubulin_C
Anam_bml PRLHFFMVGFAPLTSRNAHSFRAVSVPELTQQIFDPKNMMAATDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRIGDQFSAMFR 390 Tubulin_C
Apul_bml PRLHFFMVGFAPLTSRNAHSFRAVSVPELTQQIFDPKNMMAATDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFSAMFR 390 Tubulin_C
Amel_bml PRLHFFMVGFAPLTSRNAHSFRAVSVPELTQQIFDPKNMMAATDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFSAMFR 390 Tubulin_C
*****************.** ************:****** **:***********************************:******************** ************:*******:*:**:***
Ncra_bml RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAGVDEEEEEYEEEAPLEGEE 447
Asub_bml RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASVSEGEEEYDEEAPMEAEE 447 Misat_Tub_SegII
Anam_bml RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASISEGEEEYDEEAPMEAEE 447 Misat_Tub_SegII
Apul_bml RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASISEGEEEYDEEAPLEAEE 447
Amel_bml RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASISEGEEEYDEEAPMEAEE 447 Misat_Tub_SegII
****************************** ******:*.:.* ****:****:*.*
Input files: MFA/Ncra.CLOCK.v02.Aure.bml.aln (alignment), ALN//Ncra.CLOCK.v02.Aure.bml.dom.rgns (regions: exons, domains, low-complexity, etc)
5 sequences, alignment length = 520
sequence lengths:
447 Ncra_bml
447 Asub_bml
447 Anam_bml
447 Apul_bml
447 Amel_bml
| # | domain |
Ncra_bml | Asub_bml | Anam_bml | Apul_bml | Amel_bml |
|---|
| 1 | Misat_Tub_SegII | 1 1..99
| 1 1..101
2 403..443
| 1 1..101
2 404..443
| 1 1..101
| 1 1..101
2 404..443
|
| 2 | Tubulin | 1 2..223
| 1 2..223
| 1 2..223
| 1 2..223
| 1 2..223
|
| 3 | Tubulin_3 | 1 98..245
| 1 98..245
| 1 98..245
| 1 98..245
| 1 98..245
|
| 4 | Tubulin_C | 1 260..382
| 1 260..382
| 1 260..382
| 1 260..382
| 1 260..382
|
| |
ARC.colors file was not found, using default colors.
Alignment Regions Colorize, ARC v061