ace-4
Ncra_ace-4 -MIVPVLSR-------QALR-HASVARVALP-SLTRWYAS--YPPHTVVKMPALSPTMTSGGIGAWQKKPGDKIEPGEVLVEIETDKAQMDFEFQEEGVLAKILKDSGEKDVAVGNPIAILVEEGTDVNA 118 Biotin_lipoyl
Asub_ace-4 MSAAALLARASGRLCLQSLRARESVATPATFGALSRYYASKSFPPHTVITMPALSPTMTAGNIGTWQKKAGDALAPGDVLVEIETDKAQMDFEFQEEGVLIKVLKDSGAKDVAVGNPIAVMAEEGTDVSA 130 Biotin_lipoyl
Anam_ace-4 MSAAALLSRASGRLCLQSLRARESVATPAVFGALSRYYASKSFPPHTIITMPALSPTMTAGNIGTWQKKAGDALAPGDVLVEIETDKAQMDFEFQEEGVLIKVLKDSGAKDVAVGNPIAVMAEEGTDVSA 130 Biotin_lipoyl
Apul_ace-4 MSAAALLARASGRVCLQSLRARESVATPAMFGALSRYYASKSFPPHTVITMPALSPTMTAGNIGTWQKKAGDALAPGDVLVEIETDKAQMDFEFQEEGVLIKVLKDSGAKDVAVGNPIAVMAEEGTDVSA 130 Biotin_lipoyl
Amel_ace-4 MSAAALLARASGRLCLQSLRARESVATPALFGALSRYYASKSFPPHTIISMPALSPTMTAGNIGAWQKKAGDALAPGDVLVEIETDKAQMDFEFQEEGVLVKVLKDSGAKDVAVGNPIAVMAEEGTDVSA 130 Biotin_lipoyl
..:*:* *:** : *** * :*:*:*** :****::.********* *.**:****.** : **:********************** *:***** ********** :.******.
Ncra_ace-4 FKDFTLKDAGGETSP-------AVPKDEPKNESTASAPTPAP---TPAPEPENTSFTG-RFQTALEREPNALPAAKRLAREKGIDLRNVKGSGPGGKITEEDVKKALASAPAAGAAAA----AYTDVPIS 233 E3_binding 2-oxoacid_dh
Asub_ace-4 FDDFTVEDAGGQKEAKEGSGQEALDASEPPSNSSSTAPAPAPAQSTPAPQPEESESSGERLQTALQRAPKLSPAAQKLALEKGVAINKVKGSGPGGRVTKEDIEKFKPAATASAAPAG--LPTYEDVPAS 258 E3_binding 2-oxoacid_dh
Anam_ace-4 FDSFTVEDAGGEKQAKEGSGQEAANASEPPSNSSSTAPAPAPTQSSSAPQAQESESSGERLQTALERQPKLSPAAQKLALEKGVAISQVKGTGPGGRVTKEDIEKFKPAATAAAAPAGAAAAAYEDVPAS 260 E3_binding 2-oxoacid_dh
Apul_ace-4 FDDFTVEDAGGESKAKEGSGQEAANASEPPSNSSKTAPAPA--ESSPAPQAQETESSGERLQTALQRQPKLSPAAQKLALEKGVAISQVKGTGRGGVITKEDIEKFKPAGPAAAAPAG--LPTYEDVPAS 256 E3_binding 2-oxoacid_dh
Amel_ace-4 FESFTIEDAGGQKEAKEGSGQEAANASEPPSNSSGTAPAPA--QSSPAPQAQESESTGERLQTALERQPKLSPAAQKLALEKGVAISQVKGTGPGGRITKEDIEKFKPAATAAAAPAG--VASYEDVPAS 256 E3_binding 2-oxoacid_dh
**..**::****:... * .** .:*: :**:** :.** .:::. :* *:****:* *: ***::** ***: : :***:* ** :*:**::* .: .*:.*.*. :* ***
Ncra_ace-4 GMRKTIAARLKESVTENPHFFVSTNLSVSKLLKLRQALNSSADGRYKLSVNDFLIKAMGIASKRVPTVNSSWRDG----VIRQFETVDVSVAVATPNGLITPIVKGVEGKGLESISAAVKELAKKARDGK 359 2-oxoacid_dh DUF3614
Asub_ace-4 SMRKTIAARLTQSMNENPHYFVASSISVSKLMKLRQALNSAADAKYKLSVNDFLVKALAAAARKVPAANSSWREENGNVFVRQHNTVDVSVAVATPVGLMTPIVKNVNGTGLESISSQIKELGKRARDGK 388 2-oxoacid_dh E3_binding
Anam_ace-4 SMRKTIASRLVQSMNENPHYFVASSISVSKLMKLRVALNSAADGKYKLSVNDFLIKALAVAARKVPAANSSWREENGNVFIRQNNTVDVSVAVATPVGLMTPIVKNVNGTGLESISSQVKALGKSARDGK 390 2-oxoacid_dh Biotin_lipoyl E3_binding
Apul_ace-4 SMRKTIAARLTQSMNENPHYFVASSISVSKLMKLRQALNSAADAKYKLSVNDFLVKALAAAARKVPAANSSWREENGNVFVRQHNTVDVSVAVATPVGLMTPIVKNVNGTGLESISSQIKELGKRARDGK 386 2-oxoacid_dh E3_binding
Amel_ace-4 SMRKTIAARLTQSMNENPHYFVASSISVSKLMKLRQALNSAADAKYKLSVNDFLVKALAAAARKVPAANSSWREENGNVFIRQHNTVDVSVAVATPVGLMTPIVKNVNGTGLESISSQIKELGKRARDGK 386 2-oxoacid_dh E3_binding
*.******:** :*:.****:**::.:*****:*** *** :**.:*********:**:. *:::**:.*****: .:** :*********** ** *****.*:*.******: :* *.* ****
Ncra_ace-4 LKPEEYQGGSISISNMGMNPAVQSFTAIINPPQAAILAVGAPQKVAVPVENEDGTTGVSWDEQIIVTASFDHKVVDGAVGAEWIRELKKVIENPLELLL 458 DUF3614 2-oxoacid_dh
Asub_ace-4 LKPEEYQGGTITISNMGMNAAIDRFTAVINPPQACIIAVGAVKKVAVPSENED---GIEWDEQIVITGSFDHKVVDGAVGGEFMKELKAAIENPLSLML 484 2-oxoacid_dh Biotin_lipoyl
Anam_ace-4 LKPEQYQGGTITISNMGMNAAIDRFTAVINPPQACIIAVGAVKKVAIPSESED---GIEWDDQIVITGSFDHKVVDGAVGGEFMKELKAAIENPLNLML 486 2-oxoacid_dh
Apul_ace-4 LKPEEYQGGTITISNMGMNAAIDRFTAVINPPQACIIAVGAVKKVAVPSENED---GIEWDEQIVITGSFDHKVVDGAVGGEFMKELKAAIENPLSLML 482 2-oxoacid_dh Biotin_lipoyl
Amel_ace-4 LKPEEYQGGTITISNMGMNAAIDRFTAVINPPQACIIAVGAVKKVAIPSENED---GIEWDEQIVITGSFDHKVVDGAVGGEFMKELKAAIENPLSLML 482 2-oxoacid_dh
*****:****:*:*******.*:: ***:* ****.*:**** :***:* *.** *:.**:**::*.************.*:::*** *****.*:
Input files: MFA/Ncra.CLOCK.v02.Aure.ace-4.aln (alignment), ALN//Ncra.CLOCK.v02.Aure.ace-4.dom.rgns (regions: exons, domains, low-complexity, etc)
5 sequences, alignment length = 520
sequence lengths:
458 Ncra_ace-4
484 Asub_ace-4
486 Anam_ace-4
482 Apul_ace-4
482 Amel_ace-4
# | domain |
Ncra_ace-4 | Asub_ace-4 | Anam_ace-4 | Apul_ace-4 | Amel_ace-4 |
1 | 2-oxoacid_dh | 1 223..457
| 1 248..483
| 1 250..485
| 1 246..481
| 1 246..481
|
2 | Biotin_lipoyl | 1 34..108
| 1 46..120 2 426..449
| 1 46..120 2 284..307
| 1 46..120 2 424..447
| 1 46..120
|
3 | DUF3614 | 1 282..379
| 0 | 0 | 0 | 0 |
4 | E3_binding | 1 173..211
| 1 196..234 2 361..368
| 1 196..234 2 363..370
| 1 194..232 2 359..366
| 1 194..232 2 359..366
|
|
ARC.colors file was not found, using default colors.
Alignment Regions Colorize, ARC v061