ace-2
Ncra_ace-2 ----------------------------MFSRAARLSTRVAAPVRARVAAPRVVIPSIAARRSVTTNAASAQLEKP-LPESETEPFQVTLSDESFETYELDPPPYTLNVTKKELKQMYYDMVVVRQMEMA 101 E1_dh
Asub_ace-2 ----------------------------MLSRFAPRS--FTSSVRRAAFQPIRVAP--QVLRTVTTDAASAHADKEDVPSEDDKAFEVKLSDESFETYELDPPSFTLKTTKKELKQMYYDMVAMRRMEMA 98 E1_dh
Anam_ace-2 ----------------------------MLSRFAPRS--FTSSVRRAALQPSRVAP--QVLRTVTTDAASAHAEKDDVPSEDDKPFEVKLSDESFETYELDPPSFTLKTTKKELKQMYYDMVAMRRMEMA 98 E1_dh
Apul_ace-2 MFRIKSRRQEIGLSAPFTSTLFSSQPPVMLSRFAPRS--FTSSVRRAAFQPIRVAP--QVLRTVTTDAASAHAEKADVPSEDDADFEVKLSDESFETYMLDPPSFTLKTTKKELKQMYYDMVAMRRMEMA 126 E1_dh
Amel_ace-2 ----------------------------MLSRFAPRS--VTSSVRRAAFQPTRVAP--QVLRTVTTDAASAHAEKADVPSEDDKPFEVKLSDESFETYELDPPSFTLQTTKKELKQMYYDMVASRRMEMA 98 E1_dh
*:** * * .::.** . * * * *:***:****: :* :*..: *:*.********* ****.:**:.********** **. *:***
Ncra_ace-2 ADRLYKEKKIRGFCHLSVGQEAVAVGIEHAIERADDVITSYRCHGFAYMRGGTVRSIIGELLGRRGGIAYGKGGSMHMFTKGFYGGNGIVGAQVAVGAGLAFAHKYTGRKNASIILYGDGASNQGQVFES 231 E1_dh
Asub_ace-2 ADRLYKEKKIRGFCHLSTGQEAVAVGIEHGITKEDSVITAYRCHGFAMMRGASVKSIIGELLGRREGIAYGKGGSMHMFTKGFYGGNGIVGAQVPVGAGLAFADQYQNKKNVSISLYGDGASNQGQVFEA 228 E1_dh
Anam_ace-2 ADRLYKEKKIRGFCHLSTGQEAVAVGIEHGITKEDSVITAYRCHGFAMMRGATVKSIIGELLGRREGIAYGKGGSMHMFAKGFYGGNGIVGAQVPVGAGLAFADQYQGKKNVSISLYGDGASNQGQVFEA 228 E1_dh
Apul_ace-2 ADRLYKEKKIRGFCHLSTGQEAVAVGIEHGITKEDSVITAYRCHGFAMMRGASVKSIIGELLGRREGIAYGKGGSMHMFTKGFYGGNGIVGAQVPVGAGLAFADQYQGKKNVSISLYGDGASNQGQVFEA 256 E1_dh
Amel_ace-2 ADRLYKEKKIRGFCHLSTGQEAVAVGIEHGITKEDSVITAYRCHGFAMMRGASVKSIIGELLGRREGIAYGKGGSMHMFTKGFYGGNGIVGAQVPVGAGLAFADHYQGKKNVSIALYGDGASNQGQVFEA 228 E1_dh
******************.***********.* : *.***:******* * *.:*:********** *************:**************.********.:* .: *.** **************
Ncra_ace-2 FNMAKLWNLPALFGCENNKYGMGTSAARSSALTDYYKRGQYIPGLKVNGMDVLAVKAAVAYGKQWTNNDNGPLVLEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQHILEWGVASEEELKN 361 E1_dh
Asub_ace-2 YNMAKLWNLPVIFACENNKYGMGTAANRSSAITEYYKRGQYIPGLKINGMDVLACKQAVAFGKQWAAEGNGPLVYEFVTYRYGGHSMSDPGTTYRTREEIQRMRSTQDPIAGLKQKILDWEVATESELKS 358 E1_dh
Anam_ace-2 YNMAKLWNLPVIFACENNKYGMGTAANRSSAITEYYKRGQYIPGLKINGMDVLACKQAVAFGKQWAAEGNGPLVYEFVTYRYGGHSMSDPGTTYRTREEIQRMRSTQDPIAGLKQKILDWEVATESELKS 358 E1_dh
Apul_ace-2 YNMAKLWNLPVIFACENNKYGMGTAANRSSALTEYYKRGQYIPGLKINGMDVLACKQAVAFGKQWAAEGNGPLVYEFVTYRYGGHSMSDPGTTYRTREEIQRMRSTQDPIAGLKQKILDWEVASESELKS 386 E1_dh
Amel_ace-2 YNMAKLWNLPVIFACENNKYGMGTAANRSSAITEYYKRGQYIPGLKINGMDVLACKQAMAFGKQWAAEGKGPLVYEFVTYRYGGHSMSDPGTTYRTREEIQRMRSTQDPIAGLKQKILDWEVATEQELKS 358 E1_dh
::*********.:*.**********:* ****:*:***** ******:******* * *:*:****: :.:**** *:********************** ******:********:**:* **:*.***
Ncra_ace-2 LDKEARAYVNEEVAAAEAMPPPEANQQILFEDIYVKGTEPDFIRGRTPDELFYFKH---- 417 E1_dh
Asub_ace-2 IDKQARESVDAEVKEAEAMPPPDATPKILFEDIYVRGSEPEFLRGRIPEENFYYEQEKSS 418 E1_dh
Anam_ace-2 IDKQARESVDAEVKEAEAMPAPDATPKILFEDIYVRGSEPEYLRGRIPEENFYYEKN--- 415 E1_dh
Apul_ace-2 IDKQARESVDAEVKEAEAMPPPDATPKILYEDIYVRGSEPEFLRGRIPEENFYYEQEKSS 446 E1_dh
Amel_ace-2 IDKQARDSVDAEVKEAEAMPAPDATPKILFEDIYVRGSEPEYLRGRIPEENYYYEKN--- 415 E1_dh
.:**:** *: ** *****.*:*. :** *****:*:**:::*** *:* :*:::
Input files: MFA/Ncra.CLOCK.v02.Aure.ace-2.aln (alignment), ALN//Ncra.CLOCK.v02.Aure.ace-2.dom.rgns (regions: exons, domains, low-complexity, etc)
5 sequences, alignment length = 520
sequence lengths:
417 Ncra_ace-2
418 Asub_ace-2
415 Anam_ace-2
446 Apul_ace-2
415 Amel_ace-2
| # | domain |
Ncra_ace-2 | Asub_ace-2 | Anam_ace-2 | Apul_ace-2 | Amel_ace-2 |
|---|
| 1 | DXP_synthase_N | 1 185..319
2 351..378
| 1 182..337
| 1 182..337
| 1 210..364
| 1 182..338
|
| 2 | E1_dh | 1 89..385
| 1 86..382
| 1 86..382
| 1 114..410
| 1 86..382
|
| |
ARC.colors file was not found, using default colors.
Alignment Regions Colorize, ARC v061